Transcript: lnc-HS3ST4-1:4

Basic information

LNCipedia transcript ID: lnc-HS3ST4-1:4 
LNCipedia gene ID: lnc-HS3ST4-1
Location (hg38): chr16:26318178-26334376
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 597 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024355; NONHSAT141417
Alternative gene names: XLOC_011679; linc-C16orf82


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.0124 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HS3ST4-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HS3ST4-1:6
3.1 lnc-HS3ST4-1:4
4.0 lnc-HS3ST4-1:4
4.1 lnc-HS3ST4-1:4
5.0 lnc-HS3ST4-1:4
5.1 lnc-SGF29-40:11
5.2 lnc-HS3ST4-1:4