Transcript: lnc-GRXCR1-4:5

Basic information

LNCipedia transcript ID: lnc-GRXCR1-4:5 
LNCipedia gene ID: lnc-GRXCR1-4
Location (hg38): chr4:43340412-43341041
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 259 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT096205; FPKM1_group_23299_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.8928 non-coding 
CPAT coding probability 4.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GRXCR1-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRXCR1-4:5
4.0 lnc-GRXCR1-4:5
4.1 lnc-GRXCR1-4:5
5.0 lnc-GRXCR1-4:5
5.1 lnc-GABRB1-18:1
5.2 lnc-GRXCR1-4:5