Transcript: lnc-GPR55-3:1

Basic information

LNCipedia transcript ID: lnc-GPR55-3:1 
LNCipedia gene ID: lnc-GPR55-3
Location (hg38): chr2:230586028-230586993
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 652 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004610; NONHSAT077297
Alternative gene names: XLOC_002514; linc-SP110-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.3225 non-coding 
CPAT coding probability 1.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR55-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR55-3:1
3.1 lnc-GPR55-3:1
4.0 lnc-GPR55-3:1
4.1 lnc-GPR55-3:1
5.0 lnc-GPR55-3:1
5.1 lnc-HTR2B-5:1
5.2 lnc-GPR55-3:1