Transcript: LINC00565:7

Basic information

LNCipedia transcript ID: LINC00565:7 
LNCipedia gene ID: LINC00565
Location (hg38): chr13:113926525-113934287
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7579 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022133; NONHSAT035401
Alternative gene names: XLOC_010743; linc-GAS6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.1452 non-coding 
CPAT coding probability 33.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00565:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GAS6-3:1
3.1 lnc-GAS6-3:1
4.0 lnc-GAS6-3:1
4.1 lnc-GAS6-3:1
5.0 lnc-GAS6-3:1
5.1 LINC00565:2
5.2 LINC00565:7