Transcript: lnc-FRS3-1:1

Basic information

LNCipedia transcript ID: lnc-FRS3-1:1 
LNCipedia gene ID: lnc-FRS3-1
Location (hg38): chr6:41795969-41796618
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 281 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000507725.1; RP11-298J23.6-001; OTTHUMT00000145711.1; NONHSAT112775
Alternative gene names: ENSG00000251403.1; RP11-298J23.6; OTTHUMG00000067929.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.1073 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FRS3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRS3-1:1
4.0 lnc-FRS3-1:1
4.1 lnc-FRS3-1:1
5.0 lnc-FRS3-1:1
5.1 lnc-TREML2-23:1
5.2 lnc-FRS3-1:1