Transcript: lnc-FKBP3-1:2

Basic information

LNCipedia transcript ID: lnc-FKBP3-1:2 
LNCipedia gene ID: lnc-FKBP3-1
Location (hg38): chr14:45083048-45083977
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 800 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000506005; ENST00000506005.2; CTD-3028N15.1-001; OTTHUMT00000410461.1; NONHSAT036635
Alternative gene names: ENSG00000249163; CTD-3028N15.1; ENSG00000249163.2; OTTHUMG00000170806.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3267 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FKBP3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FKBP3-1:4
3.1 lnc-FKBP3-1:2
4.0 lnc-FKBP3-1:2
4.1 lnc-FKBP3-1:2
5.0 lnc-FKBP3-1:2
5.1 lnc-RTN1-153:4
5.2 lnc-FKBP3-1:2