Transcript: lnc-FKBP3-1:1

Basic information

LNCipedia transcript ID: lnc-FKBP3-1:1 
LNCipedia gene ID: lnc-FKBP3-1
Location (hg38): chr14:45083051-45083977
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 797 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute
Alternative transcript names: ENST00000506005; TCONS_00022408
Alternative gene names: ENSG00000249163; XLOC_011011; linc-KLHL28-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3267 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FKBP3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FKBP3-1:1
3.1 lnc-FKBP3-1:1
4.0 lnc-FKBP3-1:1
4.1 lnc-FKBP3-1:1
5.0 lnc-FKBP3-1:1
5.1 lnc-RTN1-153:1
5.2 lnc-FKBP3-1:1