Transcript: lnc-FGF9-3:3

Basic information

LNCipedia transcript ID: lnc-FGF9-3:3 
LNCipedia gene ID: lnc-FGF9-3
Location (hg38): chr13:22263270-22274801
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 325 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021717; NONHSAT032421
Alternative gene names: XLOC_010302; linc-SGCG-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -183.9521 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF9-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FGF9-3:3
3.1 lnc-FGF9-3:3
4.0 lnc-FGF9-3:3
4.1 lnc-FGF9-3:3
5.0 lnc-FGF9-3:3
5.1 lnc-GTF3A-103:17
5.2 lnc-FGF9-3:3