Transcript: lnc-ETV3-2:2

Basic information

LNCipedia transcript ID: lnc-ETV3-2:2 
LNCipedia gene ID: lnc-ETV3-2
Location (hg38): chr1:157287128-157287995
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 392 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001693; NONHSAT006934
Alternative gene names: XLOC_001052; linc-ETV3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -798.9866 non-coding 
CPAT coding probability 31.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETV3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ETV3-2:2
3.1 lnc-ETV3-2:2
4.0 lnc-ETV3-2:2
4.1 lnc-ETV3-2:2
5.0 lnc-ETV3-2:2
5.1 lnc-PAQR6-30:1
5.2 lnc-ETV3-2:2