Transcript: lnc-EPSTI1-3:2

Basic information

LNCipedia transcript ID: lnc-EPSTI1-3:2 
LNCipedia gene ID: lnc-EPSTI1-3
Location (hg38): chr13:42741599-42747337
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 750 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022265; NONHSAT033437
Alternative gene names: XLOC_010582; linc-KIAA0564-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.3408 non-coding 
CPAT coding probability 31.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPSTI1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EPSTI1-3:2
3.1 lnc-EPSTI1-3:2
4.0 lnc-EPSTI1-3:2
4.1 lnc-EPSTI1-3:2
5.0 lnc-EPSTI1-3:2
5.1 lnc-CCDC169-80:7
5.2 lnc-EPSTI1-3:2