Transcript: LINC01967:8

Basic information

LNCipedia transcript ID: LINC01967:8 
LNCipedia gene ID: LINC01967
Location (hg38): chr3:27997210-28028604
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 755 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000356047; ENST00000356047.3; AC092415.1-002; OTTHUMT00000340997.1
Alternative gene names: ENSG00000235493; AC092415.1; ENSG00000235493.1; OTTHUMG00000155651.1; LINC01967


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.6434 non-coding 
CPAT coding probability 65.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01967:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EOMES-2:1
3.1 lnc-EOMES-2:1
4.0 lnc-EOMES-2:1
4.1 lnc-EOMES-2:1
5.0 lnc-EOMES-2:1
5.1 LINC01967:4
5.2 LINC01967:8