Transcript: lnc-EIF4G3-5:1

Basic information

LNCipedia transcript ID: lnc-EIF4G3-5:1 
LNCipedia gene ID: lnc-EIF4G3-5
Location (hg38): chr1:21272798-21290213
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 398 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT001402
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 374.0576 coding 
CPAT coding probability 91.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EIF4G3-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF4G3-5:1
4.0 lnc-EIF4G3-5:1
4.1 lnc-EIF4G3-5:1
5.0 lnc-EIF4G3-5:1
5.1 lnc-HSPG2-7:1
5.2 lnc-EIF4G3-5:1