Transcript: lnc-EDEM2-2:2

Basic information

LNCipedia transcript ID: lnc-EDEM2-2:2 
LNCipedia gene ID: lnc-EDEM2-2
Location (hg38): chr20:35201747-35203288
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1542 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT079473; ENST00000594413.1
Alternative gene names: ENSG00000269202.1; RP4-614O4.12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.5908 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDEM2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF6-2:1
4.0 lnc-EIF6-2:1
4.1 lnc-EIF6-2:1
5.0 lnc-EIF6-2:1
5.1 lnc-EIF6-4:1
5.2 lnc-EDEM2-2:2