Transcript: lnc-ERG-4:1

Basic information

LNCipedia transcript ID: lnc-ERG-4:1 
LNCipedia gene ID: lnc-ERG-4
Location (hg38): chr21:37939000-37940536
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 321 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2214_chr21:39311302-39312839_adrenal
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.4601 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERG-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSCR4-4:1
4.0 lnc-DSCR4-4:1
4.1 lnc-DSCR4-4:1
5.0 lnc-DSCR4-4:1
5.1 lnc-CRYZL1-61:1
5.2 lnc-ERG-4:1