Transcript: lnc-ERG-11:1

Basic information

LNCipedia transcript ID: lnc-ERG-11:1 
LNCipedia gene ID: lnc-ERG-11
Location (hg38): chr21:37834330-37836200
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 712 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2213_chr21:39206631-39208502_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.741 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERG-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSCR4-10:1
4.0 lnc-DSCR4-10:1
4.1 lnc-DSCR4-10:1
5.0 lnc-DSCR4-10:1
5.1 lnc-CRYZL1-56:1
5.2 lnc-ERG-11:1