Transcript: LINC02051:3

Basic information

LNCipedia transcript ID: LINC02051:3 
HGNC Gene Symbol: LINC02051    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2051
Ensembl Gene ID: ENSG00000226859
Ensembl Transcript ID: ENST00000456535
Location (hg38): chr3:186476727-186478370
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 690 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005684; ENST00000456535; ENST00000456535.1; RP11-48F14.2-001; OTTHUMT00000344807.1; NONHSAT093825
Alternative gene names: XLOC_002959; linc-DNAJB11-2; ENSG00000226859; RP11-48F14.2; ENSG00000226859.1; OTTHUMG00000156619.1; LINC02051


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.4442 non-coding 
CPAT coding probability 5.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02051:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DNAJB11-2:1
3.1 lnc-DNAJB11-2:1
4.0 lnc-DNAJB11-2:1
4.1 lnc-DNAJB11-2:1
5.0 lnc-DNAJB11-2:1
5.1 LINC02051:2
5.2 LINC02051:3