Transcript: LINC01827:6

Basic information

LNCipedia transcript ID: LINC01827:6 
LNCipedia gene ID: LINC01827
Location (hg38): chr2:195481349-195614886
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2648 bp
Exons: 11
Sources: NONCODE v4
Alternative transcript names: NONHSAT076174
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.0737 non-coding 
CPAT coding probability 9.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01827:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAH7-1:2
4.0 lnc-DNAH7-1:2
4.1 lnc-DNAH7-1:2
5.0 lnc-DNAH7-1:2
5.1 LINC01827:2
5.2 LINC01827:6