Transcript: LINC02148:6

Basic information

LNCipedia transcript ID: LINC02148:6 
LNCipedia gene ID: LINC02148
RefSeq ID: NR_104609
Location (hg38): chr5:118282574-118284777
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1219 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104609; NR_104609.1
Alternative gene names: HNCAT21


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 60.3242 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02148:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DMXL1-3:3
4.0 lnc-DMXL1-3:3
4.1 lnc-DMXL1-3:3
5.0 lnc-DMXL1-3:3
5.1 LINC02148:3
5.2 LINC02148:6