Transcript: LINC02148:7

Basic information

LNCipedia transcript ID: LINC02148:7 
HGNC Gene Symbol: LINC02148    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2148
Ensembl Gene ID: ENSG00000250427
Ensembl Transcript ID: ENST00000503877
Location (hg38): chr5:118282575-118284782
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1223 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000503877; ENST00000503877.1; CTD-3179P9.2-001; OTTHUMT00000370949.1; NONHSAT103395
Alternative gene names: ENSG00000250427; CTD-3179P9.2; ENSG00000250427.1; OTTHUMG00000162887.1; HNCAT21; LINC02148


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 60.3242 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02148:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DMXL1-3:2
3.1 lnc-DMXL1-3:2
4.0 lnc-DMXL1-3:2
4.1 lnc-DMXL1-3:2
5.0 lnc-DMXL1-3:2
5.1 LINC02148:4
5.2 LINC02148:7