Transcript: lnc-XKR5-2:1

Basic information

LNCipedia transcript ID: lnc-XKR5-2:1 
LNCipedia gene ID: lnc-XKR5-2
Location (hg38): chr8:6799675-6801396
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT124790
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.0824 non-coding 
CPAT coding probability 8.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DEFB1-2:1
4.0 lnc-DEFB1-2:1
4.1 lnc-DEFB1-1:11
5.0 lnc-DEFB1-1:11
5.1 lnc-DEFA1B-11:1
5.2 lnc-XKR5-2:1