Transcript: lnc-DDX47-3:1

Basic information

LNCipedia transcript ID: lnc-DDX47-3:1 
LNCipedia gene ID: lnc-DDX47-3
Location (hg38): chr12:12915192-12917931
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2740 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT027013
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.6623 non-coding 
CPAT coding probability 4.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DDX47-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DDX47-3:1
4.0 lnc-DDX47-3:1
4.1 lnc-DDX47-3:1
5.0 lnc-DDX47-3:1
5.1 lnc-BCL2L14-28:1
5.2 lnc-DDX47-3:1