Transcript: LINC02118:4

Basic information

LNCipedia transcript ID: LINC02118:4 
HGNC Gene Symbol: LINC02118    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2118
Ensembl Gene ID: ENSG00000248789
Ensembl Transcript ID: ENST00000505899
Location (hg38): chr5:52008031-52043909
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 407 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT101400; ENST00000505899.5
Alternative gene names: ENSG00000248789.5; CTD-2203A3.1; LINC02118


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.8004 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02118:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2203A3.1.1-3:1
4.0 lnc-CTD-2203A3.1.1-3:1
4.1 lnc-CTD-2203A3.1.1-3:1
5.0 lnc-CTD-2203A3.1.1-3:1
5.1 LINC02118:2
5.2 LINC02118:4