Transcript: lnc-CRYBA4-17:1

Basic information

LNCipedia transcript ID: lnc-CRYBA4-17:1 
LNCipedia gene ID: lnc-CRYBA4-17
Ensembl Gene ID: ENSG00000280025
Ensembl Transcript ID: ENST00000623947
Location (hg38): chr22:27102766-27107019
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4254 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623947.1
Alternative gene names: ENSG00000280025.1; CTA-992D9.8; AL008638.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.5438 non-coding 
CPAT coding probability 14.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRYBA4-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CRYBA4-17:1
4.1 lnc-CRYBA4-17:1
5.0 lnc-CRYBA4-17:1
5.1 lnc-CABIN1-56:1
5.2 lnc-CRYBA4-17:1