Transcript: lnc-CNTROB-1:1

Basic information

LNCipedia transcript ID: lnc-CNTROB-1:1 
LNCipedia gene ID: lnc-CNTROB-1
Location (hg38): chr17:7954868-7955622
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 430 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT145471
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
GSIVNIVDIK 92.6829268292683% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.826 non-coding 
CPAT coding probability 5.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CNTROB-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNTROB-1:1
4.0 lnc-CNTROB-1:1
4.1 lnc-CNTROB-1:1
5.0 lnc-CNTROB-1:1
5.1 lnc-CNTROB-1:1
5.2 lnc-CNTROB-1:1