Transcript: lnc-CD180-8:1

Basic information

LNCipedia transcript ID: lnc-CD180-8:1 
LNCipedia gene ID: lnc-CD180-8
Location (hg38): chr5:67179613-67180587
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 975 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT101805; ENST00000602471.1
Alternative gene names: ENSG00000270107.1; CTD-2306M10.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.5812 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD180-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD180-8:1
4.0 lnc-CD180-8:1
4.1 lnc-CD180-8:1
5.0 lnc-CD180-8:1
5.1 lnc-TRIM23-18:1
5.2 lnc-CD180-8:1