Transcript: lnc-MCUR1-1:4

Basic information

LNCipedia transcript ID: lnc-MCUR1-1:4 
LNCipedia gene ID: lnc-MCUR1-1
Location (hg38): chr6:14229811-14231213
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 437 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00012085
Alternative gene names: XLOC_005613; linc-CCDC90A-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.8092 non-coding 
CPAT coding probability 15.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCUR1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCDC90A-1:2
3.1 lnc-CCDC90A-1:2
4.0 lnc-CCDC90A-1:2
4.1 lnc-CCDC90A-1:2
5.0 lnc-CCDC90A-1:2
5.1 lnc-ECI2-272:4
5.2 lnc-MCUR1-1:4