Transcript: lnc-PTGR1-2:3

Basic information

LNCipedia transcript ID: lnc-PTGR1-2:3 
LNCipedia gene ID: lnc-PTGR1-2
Location (hg38): chr9:111591592-111613031
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 294 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT133978
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.8309 non-coding 
CPAT coding probability 56.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PTGR1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf29-2:3
4.0 lnc-C9orf29-2:3
4.1 lnc-C9orf29-2:3
5.0 lnc-C9orf29-2:3
5.1 lnc-SLC46A2-44:3
5.2 lnc-PTGR1-2:3