Transcript: C5orf64-AS1:14

Basic information

LNCipedia transcript ID: C5orf64-AS1:14 
LNCipedia gene ID: C5orf64-AS1
Location (hg38): chr5:61732790-61735668
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1249 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00009283
Alternative gene names: XLOC_004844; linc-C5orf43-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -206.0929 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C5orf64-AS1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C5orf43-3:4
3.1 lnc-C5orf43-5:5
4.0 lnc-C5orf43-5:5
4.1 lnc-C5orf43-5:5
5.0 lnc-C5orf43-5:5
5.1 C5orf64-AS1:7
5.2 C5orf64-AS1:14