Transcript: C5orf64-AS1:15

Basic information

LNCipedia transcript ID: C5orf64-AS1:15 
HGNC Gene Symbol: C5orf64-AS1    
HGNC Full Gene Name: C5orf64 antisense RNA 1
Ensembl Gene ID: ENSG00000251575
Ensembl Transcript ID: ENST00000506550
Location (hg38): chr5:61732774-61735668
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1265 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000506550; ENST00000506550.1; CTD-2170G1.2-001; OTTHUMT00000368919.1
Alternative gene names: ENSG00000251575; CTD-2170G1.2; ENSG00000251575.2; OTTHUMG00000162439.2; C5orf64-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -206.0929 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C5orf64-AS1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C5orf43-3:5
3.1 lnc-C5orf43-5:4
4.0 lnc-C5orf43-5:4
4.1 lnc-C5orf43-5:4
5.0 lnc-C5orf43-5:4
5.1 C5orf64-AS1:8
5.2 C5orf64-AS1:15