Transcript: lnc-SMCO1-2:1

Basic information

LNCipedia transcript ID: lnc-SMCO1-2:1 
LNCipedia gene ID: lnc-SMCO1-2
Location (hg38): chr3:196468940-196470902
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1877 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT094343
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1673 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMCO1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf43-2:2
4.0 lnc-C3orf43-2:2
4.1 lnc-C3orf43-2:2
5.0 lnc-C3orf43-2:2
5.1 lnc-TCTEX1D2-10:1
5.2 lnc-SMCO1-2:1