Transcript: lnc-PRR34-5:2

Basic information

LNCipedia transcript ID: lnc-PRR34-5:2 
LNCipedia gene ID: lnc-PRR34-5
Location (hg38): chr22:46134916-46140939
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 515 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029733; NONHSAT087283
Alternative gene names: XLOC_014405; linc-C22orf26


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.4726 non-coding 
CPAT coding probability 2.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRR34-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C22orf26-4:1
3.1 lnc-C22orf26-5:1
4.0 lnc-C22orf26-5:1
4.1 lnc-C22orf26-5:1
5.0 lnc-C22orf26-5:1
5.1 lnc-PRR34-5:1
5.2 lnc-PRR34-5:2