Transcript: lnc-KCNH1-1:3

Basic information

LNCipedia transcript ID: lnc-KCNH1-1:3 
LNCipedia gene ID: lnc-KCNH1-1
Location (hg38): chr1:210291897-210301327
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 545 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_177_chr1:210465241-210473338_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.1741 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNH1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf133-1:4
4.0 lnc-C1orf133-1:4
4.1 lnc-C1orf133-1:4
5.0 lnc-C1orf133-1:4
5.1 lnc-IRF6-13:2
5.2 lnc-KCNH1-1:3