Transcript: lnc-SMIM24-2:6

Basic information

LNCipedia transcript ID: lnc-SMIM24-2:6 
LNCipedia gene ID: lnc-SMIM24-2
Ensembl Gene ID: ENSG00000267448
Ensembl Transcript ID: ENST00000587592
Location (hg38): chr19:3296765-3302921
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 374 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060508; ENST00000587592.1; ENST00000587592.5
Alternative gene names: ENSG00000267448.1; AC010649.1; ENSG00000267448.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM24-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C19orf77-2:6
4.0 lnc-C19orf77-2:6
4.1 lnc-C19orf77-2:6
5.0 lnc-C19orf77-2:6
5.1 lnc-ZNF77-21:6
5.2 lnc-SMIM24-2:6