Transcript: LINC02190:5

Basic information

LNCipedia transcript ID: LINC02190:5 
HGNC Gene Symbol: LINC02190    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2190
Ensembl Gene ID: ENSG00000261475
Ensembl Transcript ID: ENST00000567765
Location (hg38): chr16:31549143-31553567
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 568 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567765.1; CTD-2014E2.6-001; OTTHUMT00000438859.1
Alternative gene names: ENSG00000261475.2; CTD-2014E2.6; OTTHUMG00000177758.1; LINC02190


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.5622 non-coding 
CPAT coding probability 8.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02190:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf58-3:1
4.0 lnc-C16orf58-3:1
4.1 lnc-C16orf58-3:1
5.0 lnc-C16orf58-3:1
5.1 LINC02190:2
5.2 LINC02190:5