Transcript: LINC02331:9

Basic information

LNCipedia transcript ID: LINC02331:9 
HGNC Gene Symbol: LINC02331    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2331
Ensembl Gene ID: ENSG00000235269
Ensembl Transcript ID: ENST00000418927
Location (hg38): chr14:53768942-53850882
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00022411; ENST00000418927; ENST00000418927.1; AL162759.1-001; OTTHUMT00000316372.1; NONHSAT036941
Alternative gene names: XLOC_011028; linc-DDHD1-2; ENSG00000235269; AL162759.1; ENSG00000235269.1; OTTHUMG00000150105.1; LINC02331


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.3307 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02331:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BMP4-1:1
3.1 lnc-BMP4-1:1
4.0 lnc-BMP4-1:1
4.1 lnc-BMP4-1:1
5.0 lnc-BMP4-1:1
5.1 LINC02331:4
5.2 LINC02331:9