Transcript: lnc-LIPI-19:1

Basic information

LNCipedia transcript ID: lnc-LIPI-19:1 
LNCipedia gene ID: lnc-LIPI-19
Location (hg38): chr21:13419716-13420175
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 460 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr21_135_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.9338 non-coding 
CPAT coding probability 3.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIPI-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BAGE4-6:1
4.0 lnc-BAGE4-6:1
4.1 lnc-BAGE4-6:1
5.0 lnc-BAGE4-6:1
5.1 lnc-N6AMT1-135:1
5.2 lnc-LIPI-19:1