Transcript: lnc-ATAD5-9:9

Basic information

LNCipedia transcript ID: lnc-ATAD5-9:9 
LNCipedia gene ID: lnc-ATAD5-9
Location (hg38): chr17:30709639-30770024
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1611 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000499895
Alternative gene names: ENSG00000247185; SUZ12P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.807 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD5-9:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATAD5-1:1
3.1 lnc-ATAD5-3:1
4.0 lnc-ATAD5-3:1
4.1 lnc-ATAD5-3:1
5.0 lnc-ATAD5-3:1
5.1 lnc-NSRP1-19:9
5.2 lnc-ATAD5-9:9