Transcript: lnc-ASPH-6:1

Basic information

LNCipedia transcript ID: lnc-ASPH-6:1 
LNCipedia gene ID: lnc-ASPH-6
Location (hg38): chr8:60909518-60910533
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 287 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015022; NONHSAT126852
Alternative gene names: XLOC_007096; linc-CA8-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -482.4518 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASPH-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ASPH-4:1
3.1 lnc-ASPH-6:1
4.0 lnc-ASPH-6:1
4.1 lnc-ASPH-6:1
5.0 lnc-ASPH-6:1
5.1 lnc-IMPAD1-65:1
5.2 lnc-ASPH-6:1