Transcript: lnc-ARFGAP1-4:2

Basic information

LNCipedia transcript ID: lnc-ARFGAP1-4:2 
LNCipedia gene ID: lnc-ARFGAP1-4
Location (hg38): chr20:63278534-63293450
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1073 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ygw_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -193.6371 non-coding 
CPAT coding probability 26.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARFGAP1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COL20A1-4:2
4.0 lnc-ARFGAP1-4:2
4.1 lnc-ARFGAP1-4:2
5.0 lnc-ARFGAP1-4:2
5.1 lnc-GNAS-63:2
5.2 lnc-ARFGAP1-4:2