Transcript: lnc-APTX-2:7

Basic information

LNCipedia transcript ID: lnc-APTX-2:7 
LNCipedia gene ID: lnc-APTX-2
Location (hg38): chr9:32987777-33001628
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 547 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT130694
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 338.6734 coding 
CPAT coding probability 14.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-APTX-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APTX-2:7
4.0 lnc-APTX-2:7
4.1 lnc-APTX-2:7
5.0 lnc-APTX-2:7
5.1 lnc-CD72-67:5
5.2 lnc-APTX-2:7