Transcript: lnc-API5-4:7

Basic information

LNCipedia transcript ID: lnc-API5-4:7 
LNCipedia gene ID: lnc-API5-4
Location (hg38): chr11:41850491-41859891
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 868 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT018899
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.0959 non-coding 
CPAT coding probability 4.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-API5-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-API5-4:7
4.0 lnc-API5-4:7
4.1 lnc-API5-4:7
5.0 lnc-API5-4:7
5.1 lnc-CAPRIN1-55:3
5.2 lnc-API5-4:7