Transcript: LINC01892:5

Basic information

LNCipedia transcript ID: LINC01892:5 
HGNC Gene Symbol: LINC01892    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1892
Ensembl Gene ID: ENSG00000265514
Ensembl Transcript ID: ENST00000579141
Location (hg38): chr18:5084992-5095815
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 507 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579141.1; RP11-92G19.2-002; OTTHUMT00000442009.1; NONHSAT057048
Alternative gene names: ENSG00000265514.1; RP11-92G19.2; OTTHUMG00000178432.1; LINC01892


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.4599 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01892:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP001496.1-5:2
4.0 lnc-AP001496.1-5:2
4.1 lnc-AP001496.1-5:2
5.0 lnc-AP001496.1-5:2
5.1 LINC01892:3
5.2 LINC01892:5