Transcript: LINC02149:4

Basic information

LNCipedia transcript ID: LINC02149:4 
LNCipedia gene ID: LINC02149
RefSeq ID: NR_109944
Location (hg38): chr5:15191646-15266560
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1070 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109944; NR_109944.1
Alternative gene names: LOC101929454


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.3342 non-coding 
CPAT coding probability 33.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02149:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKH-3:2
4.0 lnc-ANKH-3:2
4.1 lnc-ANKH-3:2
5.0 lnc-ANKH-3:2
5.1 LINC02149:2
5.2 LINC02149:4