Transcript: lnc-ZMYND19-3:1

Basic information

LNCipedia transcript ID: lnc-ZMYND19-3:1 
LNCipedia gene ID: lnc-ZMYND19-3
Ensembl Gene ID: ENSG00000203987
Ensembl Transcript ID: ENST00000371390
RefSeq ID: NR_121583
Location (hg38): chr9:137867925-137892570
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3222 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT135758; ENST00000371390.1; NR_121583; NR_121583.1
Alternative gene names: ENSG00000203987.2; RP11-188C12.3; AL772363.1; LOC100133077


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.1599 non-coding 
CPAT coding probability 43.22% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZMYND19-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL772363.1-1:4
4.0 lnc-AL772363.1-1:4
4.1 lnc-AL772363.1-1:4
5.0 lnc-AL772363.1-1:4
5.1 lnc-FAM166A-16:1
5.2 lnc-ZMYND19-3:1