Transcript: lnc-ZNF837-1:17

Basic information

LNCipedia transcript ID: lnc-ZNF837-1:17 
LNCipedia gene ID: lnc-ZNF837-1
Location (hg38): chr19:58404256-58407296
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2860 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT068390; ENST00000444227.1
Alternative gene names: ENSG00000232098.2; CTD-2619J13.14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 235.9179 coding 
CPAT coding probability 37.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF837-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC012313.1-1:10
4.0 lnc-AC012313.1-1:10
4.1 lnc-AC012313.1-1:10
5.0 lnc-AC012313.1-1:10
5.1 lnc-ZNF772-41:17
5.2 lnc-ZNF837-1:17