Transcript: lnc-EXOC4-7:5

Basic information

LNCipedia transcript ID: lnc-EXOC4-7:5 
LNCipedia gene ID: lnc-EXOC4-7
Ensembl Gene ID: ENSG00000183470
Ensembl Transcript ID: ENST00000573229
Location (hg38): chr7:132659531-132672294
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 601 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT123432; ENST00000573229.1
Alternative gene names: ENSG00000183470.9; FLJ40288; AC009365.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.4039 non-coding 
CPAT coding probability 4.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXOC4-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC009365.3.1-1:5
4.0 lnc-AC009365.3.1-1:5
4.1 lnc-AC009365.3.1-1:5
5.0 lnc-AC009365.3.1-1:5
5.1 lnc-BPGM-18:5
5.2 lnc-EXOC4-7:5