Transcript: lnc-EXOC4-7:1

Basic information

LNCipedia transcript ID: lnc-EXOC4-7:1 
LNCipedia gene ID: lnc-EXOC4-7
Location (hg38): chr7:132648772-132672278
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 940 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013601; NONHSAT123430
Alternative gene names: XLOC_006254; linc-EXOC4-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.1807 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXOC4-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC009365.3.1-1:1
3.1 lnc-AC009365.3.1-1:1
4.0 lnc-AC009365.3.1-1:1
4.1 lnc-AC009365.3.1-1:1
5.0 lnc-AC009365.3.1-1:1
5.1 lnc-BPGM-18:1
5.2 lnc-EXOC4-7:1