Transcript: lnc-CCDC188-2:2

Basic information

LNCipedia transcript ID: lnc-CCDC188-2:2 
LNCipedia gene ID: lnc-CCDC188-2
Location (hg38): chr22:20152105-20152915
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 569 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT083490
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.1571 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC188-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006547.14.1-2:2
4.0 lnc-AC006547.14.1-2:2
4.1 lnc-AC006547.14.1-2:2
5.0 lnc-AC006547.14.1-2:2
5.1 lnc-RTN4R-4:2
5.2 lnc-CCDC188-2:2