Transcript: lnc-ZNF550-2:1

Basic information

LNCipedia transcript ID: lnc-ZNF550-2:1 
LNCipedia gene ID: lnc-ZNF550-2
Location (hg38): chr19:57559979-57564120
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3265 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499896
Alternative gene names: ENSG00000247474


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.8562 non-coding 
CPAT coding probability 2.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF550-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC003682.1-1:1
3.1 lnc-AC003682.1-2:1
4.0 lnc-AC003682.1-2:1
4.1 lnc-AC003682.1-2:1
5.0 lnc-AC003682.1-2:1
5.1 lnc-ZNF772-5:1
5.2 lnc-ZNF550-2:1