Transcript: ZNF252P-AS1:1

Basic information

LNCipedia transcript ID: ZNF252P-AS1:1 
HGNC Gene Symbol: ZNF252P-AS1    
HGNC Full Gene Name: ZNF252P antisense RNA 1
Ensembl Gene ID: ENSG00000255559
Ensembl Transcript ID: ENST00000527067
RefSeq ID: NR_026974
Location (hg38): chr8:145002811-145006046
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3236 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT129868; NR_026974; ENST00000527067.1; NR_026974.1
Alternative gene names: ENSG00000255559.1; ZNF252P-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.7381 non-coding 
CPAT coding probability 80.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ZNF252P-AS1:1 no no no no

Available literature

  1. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf77-1:1
4.0 ZNF252P-AS1:1
4.1 ZNF252P-AS1:1
5.0 ZNF252P-AS1:1
5.1 ZNF252P-AS1:1
5.2 ZNF252P-AS1:1